BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009B04LP1|AL425979
(853 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1439 1683 0.0
>3x_Contig1439
Length = 7662
Score = 1683 bits (849), Expect = 0.0
Identities = 852/853 (99%)
Strand = Plus / Minus
Query: 1 gtaagtgctagctggatcgacactttgtcttccccatatatcttgaacaatttatcgatg 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5325 gtaagtactagctggatcgacactttgtcttccccatatatcttgaacaatttatcgatg 5266
Query: 61 atcatcggtaccttaatggtggcgacagaccccgttgcacctattagaatatgtactttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5265 atcatcggtaccttaatggtggcgacagaccccgttgcacctattagaatatgtactttt 5206
Query: 121 tcatcatcctctttttgaaacaattcggtaaaaggaacgtgtggttcctcttcactgatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5205 tcatcatcctctttttgaaacaattcggtaaaaggaacgtgtggttcctcttcactgatt 5146
Query: 181 cgtttcttggtagtagccttcttggcggcgacggcagcgatggggtcattataatcaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5145 cgtttcttggtagtagccttcttggcggcgacggcagcgatggggtcattataatcaaga 5086
Query: 241 gacgtggcagagggtgatagttcacggtccaggacacctgtcattttaggggacactgcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5085 gacgtggcagagggtgatagttcacggtccaggacacctgtcattttaggggacactgcg 5026
Query: 301 ccatcaccaccgttgcgcgtcccgttatttggtttagcttcgaaatagatgaaatcacca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5025 ccatcaccaccgttgcgcgtcccgttatttggtttagcttcgaaatagatgaaatcacca 4966
Query: 361 ggtatgtgcacagagttctgacgagatgatccagctccagaagtattggcagtattagta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4965 ggtatgtgcacagagttctgacgagatgatccagctccagaagtattggcagtattagta 4906
Query: 421 gccgccgttgacgtgttggtaacatgacccgtgtccggttcacgagttgtggaactgata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4905 gccgccgttgacgtgttggtaacatgacccgtgtccggttcacgagttgtggaactgata 4846
Query: 481 gaattcactggtgtgatggtgggaggagcttcgctagaagaggctactgtggttggagtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4845 gaattcactggtgtgatggtgggaggagcttcgctagaagaggctactgtggttggagtg 4786
Query: 541 cccaatttggtcgatgagggtcttgtggaaatagaaagcctatgcgcaatgactttatcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4785 cccaatttggtcgatgagggtcttgtggaaatagaaagcctatgcgcaatgactttatcc 4726
Query: 601 tgatgctcgggaaccgtgaatgatactgatgttgcagtcaagggtgtccttaacggtcca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4725 tgatgctcgggaaccgtgaatgatactgatgttgcagtcaagggtgtccttaacggtcca 4666
Query: 661 tgtgatcctccttgttctcttctctcaccaagtacatctctgtctgaatccctttcgcct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4665 tgtgatcctccttgttctcttctctcaccaagtacatctctgtctgaatccctttcgcct 4606
Query: 721 tctttctcagaagacttagtcaccaactgcaacttttgaataagcttctggggattcaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4605 tctttctcagaagacttagtcaccaactgcaacttttgaataagcttctggggattcaca 4546
Query: 781 taatcgtgaccgttcacaggttcataatttgggtgtctagctggtccacagcgtccagaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4545 taatcgtgaccgttcacaggttcataatttgggtgtctagctggtccacagcgtccagaa 4486
Query: 841 atctcttctatct 853
|||||||||||||
Sbjct: 4485 atctcttctatct 4473
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4891
Number of Sequences: 1807
Number of extensions: 4891
Number of successful extensions: 24
Number of sequences better than 1.0e-20: 1
length of query: 853
length of database: 10,358,551
effective HSP length: 16
effective length of query: 837
effective length of database: 10,329,639
effective search space: 8645907843
effective search space used: 8645907843
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)